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Abstract
The purpose of this study was to determine the level of diversity and genetic relationship of Panulirus versicolor lobsters in Cenderawasih Bay and Lombok waters based on the cytochrome oxidase I (COI) gene. The results showed the level of genetic diversity of the two populations was very high and generally did not differ greatly between populations. We identified 6 haplotypes for P. versicolor lobster populations from Cenderawasih Bay and 7 haplotypes for P. versicolor lobster populations from Lombok waters. Network analysis shows that several P. versicolor lobster individuals from the Cendeawasih Bay and Lombok waters had similar haplotypes. The population of Cenderawasih Bay with Lombok waters was closely related to the average genetic distance value P-distance 0.005 (s.d 0.001) and the results of phylogenetic tree reconstruction showed that the two populations of P. versicolor lobsters form a monophyletic clade (close relatives).
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References
- Abdullah, M.F., Alimuddin, Muththalib, M., Salama, A.J., Imai, H. 2014. Genetic isolation among the Northwestern, Southwestern and Central-Eastern Indian Ocean populations of the pronghorn spiny lobster Panulirus penicillatus. International Journal of Molecular Sciences, 15: 9242.9254.
- Çiftci, Y., Okumu, I. 2002. Fish population genetics and applications of molecular markers to fisheries and aquaculture: I-basic principles of fish population genetics. Turkish Journal of Fisheries and Aquatic Sciences, 2: 145.155.
- Chow, S., Jeff, A., Miyake, Y., Konishi, K., Okazaki, M., Suzuki, N., Abdullah, M.F., Imai, H., Wakabayasi, T. and Sakai, M. 2011. Genetic isolation between western and eastern Pacific populations of pronghorn spiny lobster Panulirus penicillatus. Journal PLoS ONE, 6: e29280.
- Folmer, O., Black, M., Hoeh, W., Lutz, R., Vrijenhoek, R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3(5): 294.299.
- Fisch, A.J. 2007. Short and long-term movements of painted lobster (Panulirus versicolor) on a coral reef at Northwest Island, Australia. Coral Reefs, 26: 311.317.
- George, R.W. 1974. Coral reefs and rock lobster ecology in the Indo-West Pacific region. Proceedings of the Second International Coral Reef Symposium. Vol. 1. The Great Barrier Reef Committee, Brisbane, Australia: 321.326.
- Hedgecock, D., Nelson, K. 2009. Components of growth rate variation among laboratory cultured lobsters (Homarus). Journal of the World Aquaculture Society, 9: 125.137.
- Hobbs, J.P., Lynne, V.H., Dean, R.J., Geoffrey, P.J., Philip, L.M. 2013. High genetic diversity in geographically remote populations of endemic and widespread coral reef Angelfish. Diversity, 5:39-50.
- Nei, M. 1987. Moleculer Evolutionary Genetics. New York. Columbia University. Press. New York.
- Phillips, B.F., Melville-Smith, R., Kay, M.C., Vega-Velázquez. 2006. Panulirus species, in: Phillips, B.F. (Eds.), Lobsters: Biology, Management, Aquaculture and Fisheries. Blackwell Publishing., London: 289.315.
- Pranata, B., Fadjar, M., Iranawati, F., and Toha, A.H and Jeni. 2018. Phylogeny of the spiny lobster Panulirus versicolor in Cenderawasih Bay, Papua, Indonesia. AACL Bioflux, 11 (4): 1015-1024.
- Rozas, J., Sanchez-DeI Barrio, J.C., Messeguer., Rozas, X.R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics, 19: 2496.2497.
- Riginos, C., Douglas, K.E., Jin, Y., Shanahan, D.F., Treml, E.A. 2011. Effects of geography and life history traits on genetic differentiation in benthic marine fishes. Ecography. 34: 566.575.
- Suresh, P., Sasireka, G., Karthikeyan, K.A.M. 2012. Molecular insights into the phylogenetics of spiny lobsters of Gulf of Mannar marine biosphere reserve based on 28S rDNA. Indian Journal of Biotechnology, 11:182-186.
- Senevirathna, J., Munasinghe, D. 2014. Genetic diversity and population structure of Panulirus homarus Populations of Southern Sri Langka and South India revealed by the Mitochondrial COI gene region. International Conference on Food, Biological and Medical Sciences, Bangkok, Thailand.
- Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., Kumar, S. 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likehood, evolutionary distance and maximum parsimony method. Moleculer Biology Evolution, 28(10): 2731.2739.
- Tolley, K. A., Groeneveld, J. C., Gopal, K., Matthee, C.A. 2005. Mitochondrial DNA panmixia in spiny lobster Palinurus gilchristi suggests a population expansion. Marine Ecology Progress Series, 297:225–231.
- Tewfik, A., Mills D and Adhuri, D. 2009. Spiny lobster aquaculture in the Asia-Pacific region. Australian Centre for International Agricultural Research: 27.34.
- Yuniarti, A., Kilawati, Y dan Hariati. (2009). Kajian heterogenitas genetik abalon (Haliotis asinina) di perairan Indonesia melalui metode restriction fragment length polymorphism (RFLP) mtDNA. Laporan Penelitian Hibah Penelitian Strategis Nasional. Universitas Brawijaya, Malang.
References
Abdullah, M.F., Alimuddin, Muththalib, M., Salama, A.J., Imai, H. 2014. Genetic isolation among the Northwestern, Southwestern and Central-Eastern Indian Ocean populations of the pronghorn spiny lobster Panulirus penicillatus. International Journal of Molecular Sciences, 15: 9242.9254.
Çiftci, Y., Okumu, I. 2002. Fish population genetics and applications of molecular markers to fisheries and aquaculture: I-basic principles of fish population genetics. Turkish Journal of Fisheries and Aquatic Sciences, 2: 145.155.
Chow, S., Jeff, A., Miyake, Y., Konishi, K., Okazaki, M., Suzuki, N., Abdullah, M.F., Imai, H., Wakabayasi, T. and Sakai, M. 2011. Genetic isolation between western and eastern Pacific populations of pronghorn spiny lobster Panulirus penicillatus. Journal PLoS ONE, 6: e29280.
Folmer, O., Black, M., Hoeh, W., Lutz, R., Vrijenhoek, R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3(5): 294.299.
Fisch, A.J. 2007. Short and long-term movements of painted lobster (Panulirus versicolor) on a coral reef at Northwest Island, Australia. Coral Reefs, 26: 311.317.
George, R.W. 1974. Coral reefs and rock lobster ecology in the Indo-West Pacific region. Proceedings of the Second International Coral Reef Symposium. Vol. 1. The Great Barrier Reef Committee, Brisbane, Australia: 321.326.
Hedgecock, D., Nelson, K. 2009. Components of growth rate variation among laboratory cultured lobsters (Homarus). Journal of the World Aquaculture Society, 9: 125.137.
Hobbs, J.P., Lynne, V.H., Dean, R.J., Geoffrey, P.J., Philip, L.M. 2013. High genetic diversity in geographically remote populations of endemic and widespread coral reef Angelfish. Diversity, 5:39-50.
Nei, M. 1987. Moleculer Evolutionary Genetics. New York. Columbia University. Press. New York.
Phillips, B.F., Melville-Smith, R., Kay, M.C., Vega-Velázquez. 2006. Panulirus species, in: Phillips, B.F. (Eds.), Lobsters: Biology, Management, Aquaculture and Fisheries. Blackwell Publishing., London: 289.315.
Pranata, B., Fadjar, M., Iranawati, F., and Toha, A.H and Jeni. 2018. Phylogeny of the spiny lobster Panulirus versicolor in Cenderawasih Bay, Papua, Indonesia. AACL Bioflux, 11 (4): 1015-1024.
Rozas, J., Sanchez-DeI Barrio, J.C., Messeguer., Rozas, X.R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics, 19: 2496.2497.
Riginos, C., Douglas, K.E., Jin, Y., Shanahan, D.F., Treml, E.A. 2011. Effects of geography and life history traits on genetic differentiation in benthic marine fishes. Ecography. 34: 566.575.
Suresh, P., Sasireka, G., Karthikeyan, K.A.M. 2012. Molecular insights into the phylogenetics of spiny lobsters of Gulf of Mannar marine biosphere reserve based on 28S rDNA. Indian Journal of Biotechnology, 11:182-186.
Senevirathna, J., Munasinghe, D. 2014. Genetic diversity and population structure of Panulirus homarus Populations of Southern Sri Langka and South India revealed by the Mitochondrial COI gene region. International Conference on Food, Biological and Medical Sciences, Bangkok, Thailand.
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., Kumar, S. 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likehood, evolutionary distance and maximum parsimony method. Moleculer Biology Evolution, 28(10): 2731.2739.
Tolley, K. A., Groeneveld, J. C., Gopal, K., Matthee, C.A. 2005. Mitochondrial DNA panmixia in spiny lobster Palinurus gilchristi suggests a population expansion. Marine Ecology Progress Series, 297:225–231.
Tewfik, A., Mills D and Adhuri, D. 2009. Spiny lobster aquaculture in the Asia-Pacific region. Australian Centre for International Agricultural Research: 27.34.
Yuniarti, A., Kilawati, Y dan Hariati. (2009). Kajian heterogenitas genetik abalon (Haliotis asinina) di perairan Indonesia melalui metode restriction fragment length polymorphism (RFLP) mtDNA. Laporan Penelitian Hibah Penelitian Strategis Nasional. Universitas Brawijaya, Malang.